Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trbv4A0A075B5I2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trbv4A0A075B5I2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
Trbv4A0A075B5I2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbv4A0A075B5I2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Trbv4A0A075B5I2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv4A0A075B5I2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Gm9847-201ENSMUST00000052528 599 ntBASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv4A0A075B5I2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Trbv4A0A075B5I2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv4A0A075B5I2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv4A0A075B5I2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.77■□□□□ 0.76
Trbv4A0A075B5I2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv4A0A075B5I2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms