Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm23439-201ENSMUST00000104292 132 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm14370-201ENSMUST00000122460 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm15273-201ENSMUST00000142302 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm7023-201ENSMUST00000147295 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm14357-201ENSMUST00000178352 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm14361-201ENSMUST00000178547 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm14348-201ENSMUST00000179183 868 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm9146-201ENSMUST00000182254 1006 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm3534-201ENSMUST00000182522 1001 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Spin3-ps-201ENSMUST00000192825 770 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps54Q5SPW0 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm25723-201ENSMUST00000104530 126 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm12645-201ENSMUST00000117297 275 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm25953-201ENSMUST00000175338 83 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm5561-201ENSMUST00000178932 480 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm5259-201ENSMUST00000191231 800 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm44139-201ENSMUST00000204903 373 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gm14005-208ENSMUST00000223654 681 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps54Q5SPW0 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 4930480K15Rik-201ENSMUST00000162121 2199 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm25591-201ENSMUST00000177317 94 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm5976-201ENSMUST00000180794 996 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms