Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Pcdhga4Q91XY4 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm44155-201ENSMUST00000203923 412 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm2448-201ENSMUST00000207080 559 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 AC132260.2-201ENSMUST00000224482 344 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pcdhga4Q91XY4 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.15□□□□□ -0.79
Pcdhga4Q91XY4 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Mir291b-201ENSMUST00000104838 79 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm12950-201ENSMUST00000121683 417 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm6686-201ENSMUST00000178455 258 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm6606-201ENSMUST00000193613 947 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm45094-201ENSMUST00000207013 617 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pcdhga4Q91XY4 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms