Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm45663-201ENSMUST00000210429 1632 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.7□□□□□ -0.86
Clrn1Q8K445 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Clrn1Q8K445 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm24470-201ENSMUST00000104486 132 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Mir6366-201ENSMUST00000184472 82 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm28916-201ENSMUST00000186988 699 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm37484-201ENSMUST00000195378 2523 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm38349-201ENSMUST00000195732 462 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm3527-201ENSMUST00000198905 460 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm8796-201ENSMUST00000219122 936 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm5449-201ENSMUST00000081132 357 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.69□□□□□ -0.86
Clrn1Q8K445 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Clrn1Q8K445 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm13600-201ENSMUST00000117949 744 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm6441-201ENSMUST00000120983 696 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm17782-201ENSMUST00000174345 880 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm37319-201ENSMUST00000193500 636 ntBASIC9.68□□□□□ -0.86
Clrn1Q8K445 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.68□□□□□ -0.86
Clrn1Q8K445 Gm5905-201ENSMUST00000211731 580 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms