Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm25766-201ENSMUST00000104101 131 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC8.95□□□□□ -0.98
Cd28P31041 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm25554-201ENSMUST00000158075 113 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm9146-201ENSMUST00000182254 1006 ntBASIC8.95□□□□□ -0.98
Cd28P31041 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm8436-201ENSMUST00000210152 1080 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Gm5749-201ENSMUST00000210673 1090 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Gm9619-201ENSMUST00000211587 762 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Cd28P31041 Gm43305-202ENSMUST00000225083 705 ntBASIC8.95□□□□□ -0.98
Cd28P31041 AC119177.2-201ENSMUST00000226699 629 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cd28P31041 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Mmel1-201ENSMUST00000079269 2934 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gpn1-201ENSMUST00000076949 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC8.95□□□□□ -0.98
Cd28P31041 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Gm7356-201ENSMUST00000186636 1527 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cd28P31041 Gm7358-201ENSMUST00000189454 1527 ntBASIC8.95□□□□□ -0.98
Cd28P31041 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
Cd28P31041 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cd28P31041 Polr3f-202ENSMUST00000110017 1632 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm43817-201ENSMUST00000196459 2262 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Cdh8-205ENSMUST00000142475 3216 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm7353-201ENSMUST00000069044 2866 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cd28P31041 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm12997-201ENSMUST00000120207 640 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.94□□□□□ -0.98
Cd28P31041 Gm5801-201ENSMUST00000182247 780 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm42660-201ENSMUST00000197733 947 ntBASIC8.94□□□□□ -0.98
Cd28P31041 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC8.94□□□□□ -0.98
Cd28P31041 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Gm5905-201ENSMUST00000211731 580 ntBASIC8.94□□□□□ -0.98
Cd28P31041 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 BC106175-202ENSMUST00000219344 1213 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cd28P31041 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Napb-201ENSMUST00000028926 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 AC154849.3-201ENSMUST00000223733 1660 ntBASIC8.94□□□□□ -0.98
Cd28P31041 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Cd28P31041 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cd28P31041 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
Cd28P31041 Gm45597-201ENSMUST00000211524 1994 ntBASIC8.93□□□□□ -0.98
Cd28P31041 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Cd28P31041 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Ubox5-201ENSMUST00000028761 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cd28P31041 Hdac7-204ENSMUST00000116409 4113 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms