Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm12220-201ENSMUST00000118476 172 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm12733-201ENSMUST00000119871 767 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 1810019D21Rik-203ENSMUST00000145343 984 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm6669-201ENSMUST00000179088 997 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm6773-201ENSMUST00000182377 878 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm45620-201ENSMUST00000209980 468 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm2694-209ENSMUST00000210935 1125 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm16252-202ENSMUST00000215604 1232 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm46344-201ENSMUST00000220530 887 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm23405-201ENSMUST00000082542 160 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 1700029F12Rik-201ENSMUST00000091377 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm13450-201ENSMUST00000121107 167 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Ang-202ENSMUST00000171688 728 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm8022-201ENSMUST00000191763 904 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm44155-201ENSMUST00000203923 412 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm31941-201ENSMUST00000209689 350 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccdc188F6WEU2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Gm8818-201ENSMUST00000110797 1047 ntBASIC10.36□□□□□ -0.75
Ccdc188F6WEU2 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms