Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.06□□□□□ -0.8
Otud1Q9CUB6 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mir1249-201ENSMUST00000116791 98 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm12397-201ENSMUST00000117674 615 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mup-ps10-201ENSMUST00000119626 556 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm26208-201ENSMUST00000158677 124 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm5801-201ENSMUST00000182247 780 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm18799-201ENSMUST00000189104 913 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm6606-201ENSMUST00000193613 947 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm6855-201ENSMUST00000206307 790 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Otud1Q9CUB6 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Otud1Q9CUB6 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms