Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Wdr45-202ENSMUST00000115687 1299 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm15602-201ENSMUST00000116162 465 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm12075-201ENSMUST00000117426 397 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm16199-201ENSMUST00000160032 288 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm8893-201ENSMUST00000172146 1242 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm18513-201ENSMUST00000177313 560 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm8907-201ENSMUST00000182240 1003 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Mir6360-201ENSMUST00000184278 126 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm43664-201ENSMUST00000196038 734 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm44033-201ENSMUST00000203699 695 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm18129-201ENSMUST00000208834 1044 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 AC154548.2-201ENSMUST00000224621 469 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 AC154283.2-201ENSMUST00000228954 614 ntBASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ccdc188F6WEU2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 AC159819.3-201ENSMUST00000216940 1837 ntBASIC10.4□□□□□ -0.75
Ccdc188F6WEU2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Ccdc146-201ENSMUST00000030552 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm25455-201ENSMUST00000157946 325 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm44721-201ENSMUST00000206978 472 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm30196-201ENSMUST00000208957 160 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 AC134869.4-201ENSMUST00000224724 609 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 AC164315.1-202ENSMUST00000226723 657 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 AC139130.1-201ENSMUST00000228281 620 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm10080-201ENSMUST00000075585 438 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm22054-201ENSMUST00000083395 155 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Gm26953-205ENSMUST00000212599 1435 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccdc188F6WEU2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccdc188F6WEU2 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms