Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps54Q5SPW0 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm42714-201ENSMUST00000202063 1364 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm25561-201ENSMUST00000104607 125 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm14650-201ENSMUST00000120400 889 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm17107-201ENSMUST00000170983 553 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Mir6953-201ENSMUST00000184745 68 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.34□□□□□ -0.43
Vps54Q5SPW0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Vps54Q5SPW0 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Vps54Q5SPW0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm39312-201ENSMUST00000213586 2195 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm43412-201ENSMUST00000197455 2818 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm15707-201ENSMUST00000118804 996 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm7251-201ENSMUST00000182661 1009 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm5340-201ENSMUST00000203733 880 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm6008-201ENSMUST00000206542 874 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 AC119177.2-201ENSMUST00000226699 629 ntBASIC12.33□□□□□ -0.44
Vps54Q5SPW0 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vps54Q5SPW0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms