Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm7812-201ENSMUST00000203479 874 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm45574-201ENSMUST00000210921 331 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm6859-201ENSMUST00000218614 989 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 AC123533.3-201ENSMUST00000228056 454 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gm16477-201ENSMUST00000085365 801 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 Gm17415-201ENSMUST00000096427 789 ntBASIC10.6□□□□□ -0.71
Ybx1P62960 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Ybx1P62960 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Ybx1P62960 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ybx1P62960 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Ybx1P62960 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm13215-201ENSMUST00000117559 472 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Mir1896-201ENSMUST00000122641 81 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm3052-201ENSMUST00000186409 829 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm7924-201ENSMUST00000203975 785 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm44173-201ENSMUST00000204316 132 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gm5650-201ENSMUST00000209641 598 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 CT025689.5-201ENSMUST00000224316 986 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.59□□□□□ -0.71
Ybx1P62960 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.59□□□□□ -0.71
Ybx1P62960 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Ybx1P62960 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ybx1P62960 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Ybx1P62960 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ybx1P62960 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Ybx1P62960 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.58□□□□□ -0.72
Ybx1P62960 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ybx1P62960 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ybx1P62960 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms