Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm15720-201ENSMUST00000117133 282 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm16210-201ENSMUST00000122161 610 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 H2afy3-201ENSMUST00000151919 1112 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Tspy-ps-203ENSMUST00000186546 989 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Spin3-ps-201ENSMUST00000192825 770 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.82□□□□□ -0.84
Cdx2P43241 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm43362-201ENSMUST00000198192 2470 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cdx2P43241 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Gm44907-201ENSMUST00000207423 1633 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx2P43241 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC9.82□□□□□ -0.84
Cdx2P43241 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx2P43241 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm2492-201ENSMUST00000221355 1394 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm11652-201ENSMUST00000117842 1267 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Gm13975-201ENSMUST00000119253 782 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Gm14828-201ENSMUST00000119381 1155 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 AA623943-201ENSMUST00000121794 354 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm24352-201ENSMUST00000158966 125 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm8955-201ENSMUST00000182945 1008 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Mir6981-201ENSMUST00000184293 115 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC9.81□□□□□ -0.84
Cdx2P43241 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC9.81□□□□□ -0.84
Cdx2P43241 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cdx2P43241 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cdx2P43241 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 AC161763.1-201ENSMUST00000227063 168 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 AC123698.1-201ENSMUST00000227090 402 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cdx2P43241 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 AC134898.1-201ENSMUST00000223738 1836 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cdx2P43241 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cdx2P43241 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms