Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Cd28P31041 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cd28P31041 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC8.99□□□□□ -0.97
Cd28P31041 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cd28P31041 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cd28P31041 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Ptk2-209ENSMUST00000226988 4444 ntAPPRIS ALT1 BASIC8.99□□□□□ -0.97
Cd28P31041 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Cd28P31041 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Cd28P31041 AC133934.1-201ENSMUST00000223052 1761 ntBASIC8.99□□□□□ -0.97
Cd28P31041 Gm44106-201ENSMUST00000203153 1599 ntBASIC8.99□□□□□ -0.97
Cd28P31041 Ufl1-202ENSMUST00000102994 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Gm32914-201ENSMUST00000203815 2228 ntBASIC8.99□□□□□ -0.97
Cd28P31041 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Cd28P31041 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Rcbtb2-201ENSMUST00000022702 2971 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Txndc16-209ENSMUST00000153383 3691 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Cd28P31041 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm43412-201ENSMUST00000197455 2818 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Zmiz2-202ENSMUST00000102914 3806 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm15432-201ENSMUST00000121106 195 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Gm15031-201ENSMUST00000121341 210 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Scfd2-208ENSMUST00000151474 3834 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm44980-201ENSMUST00000205826 314 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm5186-201ENSMUST00000218781 920 ntBASIC8.98□□□□□ -0.97
Cd28P31041 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC8.98□□□□□ -0.97
Cd28P31041 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Spcs1-203ENSMUST00000226374 592 ntBASIC8.98□□□□□ -0.97
Cd28P31041 AC099645.1-201ENSMUST00000226476 1105 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Olfr1328-201ENSMUST00000081960 944 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Cd28P31041 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Smoc1-201ENSMUST00000021564 3439 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Gm37307-201ENSMUST00000193663 2621 ntBASIC8.98□□□□□ -0.97
Cd28P31041 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Cd28P31041 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd28P31041 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC8.97□□□□□ -0.97
Cd28P31041 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd28P31041 Gm42638-201ENSMUST00000196065 2587 ntBASIC8.97□□□□□ -0.97
Cd28P31041 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Cd28P31041 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd28P31041 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC8.97□□□□□ -0.97
Cd28P31041 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms