Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Med6-205ENSMUST00000161598 897 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm26119-201ENSMUST00000175601 104 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm37727-201ENSMUST00000191637 819 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm3433-201ENSMUST00000210149 1058 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm6390-201ENSMUST00000215034 589 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 AC102569.1-201ENSMUST00000221563 685 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm7959-201ENSMUST00000221823 1078 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 AC154361.2-201ENSMUST00000224747 943 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 AC102847.1-202ENSMUST00000226313 1245 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 AC130477.1-201ENSMUST00000226982 420 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 AC134793.1-202ENSMUST00000227444 803 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm7589-201ENSMUST00000085631 534 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Smok4a-201ENSMUST00000074512 1455 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.49□□□□□ -1.05
Hoxd3P09027 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Hoxd3P09027 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Hoxd3P09027 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Gm37309-201ENSMUST00000194994 1639 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Gm11801-201ENSMUST00000117807 746 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.48□□□□□ -1.05
Hoxd3P09027 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC8.48□□□□□ -1.05
Hoxd3P09027 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Hoxd3P09027 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 Mir7035-201ENSMUST00000184713 82 ntBASIC8.48□□□□□ -1.05
Hoxd3P09027 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms