Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm6298-201ENSMUST00000122262 981 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm27500-201ENSMUST00000184331 336 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm2566-201ENSMUST00000201267 431 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm5043-201ENSMUST00000202103 820 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 AC154706.1-201ENSMUST00000225482 585 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp54Q8BL06 Gm4795-201ENSMUST00000095717 1008 ntBASIC14.46□□□□□ -0.09
Usp54Q8BL06 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp54Q8BL06 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Usp54Q8BL06 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm12726-201ENSMUST00000121621 601 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Tollip-203ENSMUST00000130439 1892 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 4930479D17Rik-201ENSMUST00000146754 740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm16560-201ENSMUST00000159115 404 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Art2a-ps-201ENSMUST00000173420 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm9621-201ENSMUST00000183322 1003 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Mir6378-201ENSMUST00000183357 107 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 CT030657.4-201ENSMUST00000222177 744 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Noxred1-203ENSMUST00000222480 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 AC140244.1-201ENSMUST00000228454 229 ntBASIC14.45□□□□□ -0.1
Usp54Q8BL06 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp54Q8BL06 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Wdr45-202ENSMUST00000115687 1299 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Hmox2-203ENSMUST00000120232 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gm33815-205ENSMUST00000195574 1204 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gm8992-201ENSMUST00000204463 502 ntBASIC14.44□□□□□ -0.1
Usp54Q8BL06 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gm2981-201ENSMUST00000213947 694 ntBASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gm18515-201ENSMUST00000219755 797 ntBASIC14.44□□□□□ -0.1
Usp54Q8BL06 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Gm24146-201ENSMUST00000082760 321 ntBASIC14.44□□□□□ -0.1
Usp54Q8BL06 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Srsf7-201ENSMUST00000063417 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp54Q8BL06 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC14.44□□□□□ -0.1
Usp54Q8BL06 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms