Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 CT009515.1-201ENSMUST00000228127 586 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Tmem267-204ENSMUST00000178948 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Matn2-203ENSMUST00000226766 3252 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm11760-201ENSMUST00000122355 796 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Mir8114-201ENSMUST00000183582 111 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm5857-201ENSMUST00000198953 493 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm45538-201ENSMUST00000210771 1061 ntTSL 5 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm18500-201ENSMUST00000223493 820 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 AC093022.2-202ENSMUST00000227500 866 ntBASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Spg11Q3UHA3 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Ciao1-205ENSMUST00000174863 531 ntTSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm43442-201ENSMUST00000202865 414 ntBASIC9.49□□□□□ -0.89
Spg11Q3UHA3 AC132384.1-201ENSMUST00000219908 1195 ntBASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Dhcr7-201ENSMUST00000073878 2815 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Spg11Q3UHA3 Gm22582-201ENSMUST00000102283 94 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm24335-201ENSMUST00000104211 132 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm14239-201ENSMUST00000116491 685 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm23094-201ENSMUST00000157551 322 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Mir1964-201ENSMUST00000158514 83 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 H2-M5-203ENSMUST00000169189 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Car1-203ENSMUST00000181860 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm8976-201ENSMUST00000187136 703 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm6375-201ENSMUST00000205201 1145 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Gm38095-201ENSMUST00000192896 1402 ntBASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Spg11Q3UHA3 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms