Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Gm44139-201ENSMUST00000204903 373 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Gm5130-201ENSMUST00000210233 959 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC8.34□□□□□ -1.07
Lmo4P61969 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC8.34□□□□□ -1.07
Lmo4P61969 AC161763.1-201ENSMUST00000227063 168 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Lmo4P61969 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Gm8806-201ENSMUST00000120076 1407 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Gm45110-201ENSMUST00000205704 1402 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Lmo4P61969 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Lmo4P61969 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Gm26684-202ENSMUST00000228229 8257 ntBASIC8.34□□□□□ -1.07
Lmo4P61969 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Lmo4P61969 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Lmo4P61969 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Lmo4P61969 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Lmo4P61969 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Lmo4P61969 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Lmo4P61969 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm16439-201ENSMUST00000100687 564 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm7061-201ENSMUST00000118127 1416 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm15476-201ENSMUST00000118247 1191 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm5054-201ENSMUST00000119351 453 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm15798-201ENSMUST00000120082 408 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm26021-201ENSMUST00000158664 131 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC8.33□□□□□ -1.08
Lmo4P61969 Mir3091-201ENSMUST00000175086 76 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm6463-201ENSMUST00000182090 966 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC8.33□□□□□ -1.08
Lmo4P61969 Kif4-ps-202ENSMUST00000185083 652 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm27953-201ENSMUST00000185171 143 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm29304-201ENSMUST00000186555 695 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gm29223-201ENSMUST00000188867 695 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm43585-201ENSMUST00000199375 1403 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 AC154766.1-201ENSMUST00000226550 936 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Mir341-201ENSMUST00000093593 96 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.33□□□□□ -1.08
Lmo4P61969 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Lmo4P61969 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Lmo4P61969 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC8.32□□□□□ -1.08
Lmo4P61969 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Lmo4P61969 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms