Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm23403-201ENSMUST00000179169 110 ntBASIC15.13■□□□□ 0.01
Chd1P40201 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chd1P40201 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC15.13■□□□□ 0.01
Chd1P40201 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 AC107453.3-201ENSMUST00000228205 639 ntBASIC15.13■□□□□ 0.01
Chd1P40201 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Cxcl2-201ENSMUST00000075433 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chd1P40201 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chd1P40201 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd1P40201 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Chd1P40201 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Gm8446-201ENSMUST00000188834 2712 ntBASIC15.13■□□□□ 0.01
Chd1P40201 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC15.13■□□□□ 0.01
Chd1P40201 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Chd1P40201 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd1P40201 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Chd1P40201 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm44826-201ENSMUST00000207648 2332 ntBASIC15.12■□□□□ 0.01
Chd1P40201 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Gm12361-201ENSMUST00000119806 1044 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm13670-201ENSMUST00000120947 461 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm22484-201ENSMUST00000157992 306 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm5550-201ENSMUST00000198658 1076 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Cox19-207ENSMUST00000198966 475 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd1P40201 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm45676-201ENSMUST00000211306 715 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd1P40201 1700063D05Rik-204ENSMUST00000213914 1007 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 AC132384.1-201ENSMUST00000219908 1195 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Morn3-202ENSMUST00000045843 904 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm7936-201ENSMUST00000069529 375 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd1P40201 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm46995-201ENSMUST00000223445 1378 ntBASIC15.12■□□□□ 0.01
Chd1P40201 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm8024-201ENSMUST00000167099 1408 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Gm6482-201ENSMUST00000168128 1410 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Gm7951-201ENSMUST00000171388 1408 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd1P40201 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Cacfd1-201ENSMUST00000114003 727 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd1P40201 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd1P40201 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Chd1P40201 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Itpa-ps2-201ENSMUST00000188629 589 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd1P40201 Gm44341-201ENSMUST00000196168 138 ntBASIC15.12■□□□□ 0.01
Chd1P40201 AC125099.1-201ENSMUST00000197780 138 ntBASIC15.12■□□□□ 0.01
Chd1P40201 AC125099.2-201ENSMUST00000198228 138 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm6637-201ENSMUST00000204884 382 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm5130-201ENSMUST00000210233 959 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd1P40201 Gm10120-201ENSMUST00000219845 357 ntBASIC15.12■□□□□ 0.01
Chd1P40201 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chd1P40201 Slc30a2-204ENSMUST00000105874 3153 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Gls-203ENSMUST00000114512 2042 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chd1P40201 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Gm19337-201ENSMUST00000218100 1584 ntBASIC15.11■□□□□ 0.01
Chd1P40201 Gm12038-201ENSMUST00000117322 207 ntBASIC15.11■□□□□ 0.01
Chd1P40201 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC15.11■□□□□ 0.01
Chd1P40201 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd1P40201 Gm7442-201ENSMUST00000197778 383 ntBASIC15.11■□□□□ 0.01
Chd1P40201 Gm44306-201ENSMUST00000203058 203 ntBASIC15.11■□□□□ 0.01
Chd1P40201 Upp1-201ENSMUST00000020677 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Gm9711-201ENSMUST00000208857 327 ntBASIC15.11■□□□□ 0.01
Chd1P40201 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd1P40201 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chd1P40201 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms