Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm5424-201ENSMUST00000053865 1240 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vps54Q5SPW0 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Vps54Q5SPW0 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm4880-201ENSMUST00000207645 1696 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm12035-201ENSMUST00000121890 623 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm25545-201ENSMUST00000122673 323 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm2316-201ENSMUST00000190613 921 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm17815-201ENSMUST00000198305 895 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm6518-201ENSMUST00000208450 342 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm6353-201ENSMUST00000223234 1051 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm43305-202ENSMUST00000225083 705 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm22341-201ENSMUST00000083775 129 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps54Q5SPW0 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm45728-201ENSMUST00000211475 2979 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm24279-201ENSMUST00000104236 131 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm24471-201ENSMUST00000104485 131 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm14853-201ENSMUST00000116081 549 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm24352-201ENSMUST00000158966 125 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm20091-201ENSMUST00000179683 189 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm7765-201ENSMUST00000182585 974 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Mir6359-201ENSMUST00000183668 81 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 AC156016.4-201ENSMUST00000227470 647 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps54Q5SPW0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm8725-201ENSMUST00000221829 1333 ntBASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps54Q5SPW0 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms