Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm23081-201ENSMUST00000157845 297 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm7251-201ENSMUST00000182661 1009 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm37232-201ENSMUST00000194887 367 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm18363-201ENSMUST00000221671 730 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Gm5189-201ENSMUST00000221796 261 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Ybx1P62960 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ybx1P62960 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.64□□□□□ -0.71
Ybx1P62960 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Ybx1P62960 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Ybx1P62960 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ybx1P62960 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ybx1P62960 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm11427-201ENSMUST00000117952 1696 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm11411-201ENSMUST00000117951 719 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm12684-201ENSMUST00000118675 999 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm22885-201ENSMUST00000157410 107 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC10.63□□□□□ -0.71
Ybx1P62960 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm37390-201ENSMUST00000192452 872 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm6069-201ENSMUST00000196501 463 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm3945-201ENSMUST00000196637 683 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm43377-201ENSMUST00000201640 455 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.63□□□□□ -0.71
Ybx1P62960 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ybx1P62960 Gm18749-201ENSMUST00000222410 692 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 AC154634.3-201ENSMUST00000224589 736 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 CT025547.1-201ENSMUST00000225127 578 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 AC166061.1-201ENSMUST00000225163 1138 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ybx1P62960 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.63□□□□□ -0.71
Ybx1P62960 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC10.63□□□□□ -0.71
Ybx1P62960 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ybx1P62960 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.62□□□□□ -0.71
Ybx1P62960 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.62□□□□□ -0.71
Ybx1P62960 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.62□□□□□ -0.71
Ybx1P62960 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ybx1P62960 Gm26379-201ENSMUST00000178125 138 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms