Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm10110-202ENSMUST00000228705 3220 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm24791-201ENSMUST00000104284 131 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm25562-201ENSMUST00000104608 133 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm6158-201ENSMUST00000109467 904 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm13600-201ENSMUST00000117949 744 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm14103-201ENSMUST00000119075 366 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm14165-201ENSMUST00000121456 952 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm22146-201ENSMUST00000157397 288 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm35713-201ENSMUST00000210516 199 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm18035-201ENSMUST00000211962 589 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 AC166902.3-201ENSMUST00000216696 991 ntTSL 3 BASIC8.51□□□□□ -1.05
Hoxd3P09027 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 AC159196.1-201ENSMUST00000225524 377 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 CT025618.1-203ENSMUST00000227008 589 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hoxd3P09027 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm42499-201ENSMUST00000196193 1412 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gm5739-201ENSMUST00000208601 1703 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.51□□□□□ -1.05
Hoxd3P09027 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.51□□□□□ -1.05
Hoxd3P09027 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.51□□□□□ -1.05
Hoxd3P09027 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Hoxd3P09027 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.5□□□□□ -1.05
Hoxd3P09027 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm14375-201ENSMUST00000119490 855 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm14234-201ENSMUST00000119539 845 ntBASIC8.5□□□□□ -1.05
Hoxd3P09027 Gm11480-201ENSMUST00000120214 659 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms