Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cdx2P43241 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm13197-201ENSMUST00000117204 225 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm8754-201ENSMUST00000118391 520 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm12733-201ENSMUST00000119871 767 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm11824-201ENSMUST00000120191 846 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm12362-201ENSMUST00000121986 342 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm22616-201ENSMUST00000179783 100 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm18299-201ENSMUST00000192026 636 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm42908-201ENSMUST00000197508 870 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm8083-201ENSMUST00000203976 475 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 AC192333.3-201ENSMUST00000224041 463 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 AC122459.4-201ENSMUST00000228654 551 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cdx2P43241 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC9.87□□□□□ -0.83
Cdx2P43241 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.87□□□□□ -0.83
Cdx2P43241 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm4925-202ENSMUST00000168843 1561 ntBASIC9.87□□□□□ -0.83
Cdx2P43241 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cdx2P43241 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC9.87□□□□□ -0.83
Cdx2P43241 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cdx2P43241 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cdx2P43241 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm15661-201ENSMUST00000117390 556 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm26356-201ENSMUST00000158217 283 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm34780-201ENSMUST00000193896 949 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm5191-201ENSMUST00000222882 1236 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Rce1-203ENSMUST00000224707 1255 ntBASIC9.86□□□□□ -0.83
Cdx2P43241 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cdx2P43241 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cdx2P43241 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cdx2P43241 Gm37036-201ENSMUST00000192836 2506 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms