Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 AC154683.1-201ENSMUST00000228409 1284 ntBASIC9.04□□□□□ -0.96
Cd28P31041 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC9.04□□□□□ -0.96
Cd28P31041 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cd28P31041 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Cd28P31041 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Cd28P31041 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Cd28P31041 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.04□□□□□ -0.96
Cd28P31041 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Cd28P31041 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.04□□□□□ -0.96
Cd28P31041 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm13045-201ENSMUST00000119019 712 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Gm15808-201ENSMUST00000119046 604 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Gm6881-201ENSMUST00000121811 833 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.03□□□□□ -0.96
Cd28P31041 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm10731-201ENSMUST00000181171 448 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm7516-201ENSMUST00000186198 706 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Gm37458-201ENSMUST00000194055 410 ntBASIC9.03□□□□□ -0.96
Cd28P31041 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm9555-201ENSMUST00000200908 583 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm18561-201ENSMUST00000206027 804 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm9661-201ENSMUST00000221611 1122 ntBASIC9.03□□□□□ -0.96
Cd28P31041 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.03□□□□□ -0.96
Cd28P31041 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cd28P31041 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Cd28P31041 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Cd28P31041 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Smim1-202ENSMUST00000126119 3996 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Cd28P31041 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Mpp2-201ENSMUST00000017458 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC9.03□□□□□ -0.96
Cd28P31041 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
Cd28P31041 AC157476.2-201ENSMUST00000217574 3200 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Cd28P31041 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
Cd28P31041 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.02□□□□□ -0.96
Cd28P31041 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Cd28P31041 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.02□□□□□ -0.96
Cd28P31041 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cd28P31041 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cd28P31041 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Cd28P31041 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Cd28P31041 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.02□□□□□ -0.97
Cd28P31041 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Cd28P31041 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Cd28P31041 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Cd28P31041 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms