Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm16288-201ENSMUST00000137940 367 ntBASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm6794-201ENSMUST00000203829 457 ntBASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usf3B2RUQ2 Mir598-201ENSMUST00000102094 79 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm23062-201ENSMUST00000102349 110 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm11919-201ENSMUST00000117609 721 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm11736-201ENSMUST00000121468 505 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Mir1941-201ENSMUST00000157834 83 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm7572-201ENSMUST00000182616 766 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm5291-201ENSMUST00000201965 899 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm6518-201ENSMUST00000208450 342 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm7405-201ENSMUST00000121476 1337 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm42858-201ENSMUST00000202512 1704 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm12947-201ENSMUST00000116114 420 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm42859-201ENSMUST00000199572 193 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm8162-201ENSMUST00000213951 665 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 AC134860.2-201ENSMUST00000225277 1036 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm45867-201ENSMUST00000208201 2317 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Gm37058-201ENSMUST00000193393 1644 ntBASIC8.7□□□□□ -1.02
Usf3B2RUQ2 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms