Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Snord23-201ENSMUST00000116828 109 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm11340-201ENSMUST00000119226 412 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm11952-201ENSMUST00000121172 821 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm3828-201ENSMUST00000121817 257 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm17221-201ENSMUST00000163909 481 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm17073-201ENSMUST00000168069 556 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm21542-201ENSMUST00000182307 993 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm26976-201ENSMUST00000182929 908 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm19013-201ENSMUST00000183895 1222 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm19014-201ENSMUST00000184828 1189 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm28335-201ENSMUST00000186204 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm28558-201ENSMUST00000187373 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm28734-201ENSMUST00000188104 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm28968-201ENSMUST00000190413 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm19587-201ENSMUST00000191395 545 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm38229-201ENSMUST00000191931 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm38121-201ENSMUST00000193213 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm37991-201ENSMUST00000194297 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm38035-201ENSMUST00000194427 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm38350-201ENSMUST00000194789 696 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm43036-201ENSMUST00000200594 373 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm44138-201ENSMUST00000204939 271 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm9111-201ENSMUST00000219394 709 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Capsl-202ENSMUST00000226688 739 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 AC121542.1-201ENSMUST00000227245 721 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hoxd3P09027 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Cxcl2-201ENSMUST00000075433 1109 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm44792-201ENSMUST00000207008 1628 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm15614-201ENSMUST00000155976 1537 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Gm42603-201ENSMUST00000199893 2146 ntBASIC8.53□□□□□ -1.04
Hoxd3P09027 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxd3P09027 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxd3P09027 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms