Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ube4bQ9ES00 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube4bQ9ES00 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4bQ9ES00 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4bQ9ES00 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
Ube4bQ9ES00 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Gm7332-201ENSMUST00000118351 454 ntBASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ube4bQ9ES00 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4bQ9ES00 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4bQ9ES00 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube4bQ9ES00 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube4bQ9ES00 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms