Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim16Q99PP9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim16Q99PP9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim16Q99PP9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim16Q99PP9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.23■□□□□ 0.67
Trim16Q99PP9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim16Q99PP9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Trim16Q99PP9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.22■□□□□ 0.67
Trim16Q99PP9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.22■□□□□ 0.67
Trim16Q99PP9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim16Q99PP9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Trim16Q99PP9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim16Q99PP9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.2■□□□□ 0.66
Trim16Q99PP9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim16Q99PP9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim16Q99PP9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.18■□□□□ 0.66
Trim16Q99PP9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim16Q99PP9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim16Q99PP9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.17■□□□□ 0.66
Trim16Q99PP9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms