Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdh15Q99PJ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Gm6365-201ENSMUST00000054711 744 ntBASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh15Q99PJ1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Gm6420-201ENSMUST00000193885 723 ntBASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Pcdh15Q99PJ1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdh15Q99PJ1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Gm10812-201ENSMUST00000099864 546 ntBASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh15Q99PJ1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh15Q99PJ1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh15Q99PJ1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh15Q99PJ1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.01■■□□□ 1.27
Pcdh15Q99PJ1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdh15Q99PJ1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdh15Q99PJ1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh15Q99PJ1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Trmt13-210ENSMUST00000198454 880 ntBASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh15Q99PJ1 Gm7977-201ENSMUST00000193787 748 ntBASIC22.97■■□□□ 1.27
Pcdh15Q99PJ1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh15Q99PJ1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Gm38205-201ENSMUST00000192243 258 ntBASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdh15Q99PJ1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh15Q99PJ1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh15Q99PJ1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh15Q99PJ1 Gm13534-201ENSMUST00000121169 513 ntBASIC22.94■■□□□ 1.26
Pcdh15Q99PJ1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Mir6982-201ENSMUST00000184354 68 ntBASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdh15Q99PJ1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.92■■□□□ 1.26
Pcdh15Q99PJ1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms