Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb6Q91XZ4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb6Q91XZ4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb6Q91XZ4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb6Q91XZ4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb6Q91XZ4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb6Q91XZ4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdhb6Q91XZ4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb6Q91XZ4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb6Q91XZ4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb6Q91XZ4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb6Q91XZ4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb6Q91XZ4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb6Q91XZ4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb6Q91XZ4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb6Q91XZ4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.36■□□□□ 0.85
Pcdhb6Q91XZ4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhb6Q91XZ4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb6Q91XZ4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb6Q91XZ4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb6Q91XZ4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb6Q91XZ4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb6Q91XZ4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Gm13241-201ENSMUST00000094493 780 ntBASIC20.33■□□□□ 0.85
Pcdhb6Q91XZ4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb6Q91XZ4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb6Q91XZ4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb6Q91XZ4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb6Q91XZ4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms