Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb8Q91XZ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb8Q91XZ2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb8Q91XZ2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb8Q91XZ2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb8Q91XZ2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb8Q91XZ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb8Q91XZ2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb8Q91XZ2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb8Q91XZ2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb8Q91XZ2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb8Q91XZ2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb8Q91XZ2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb8Q91XZ2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb8Q91XZ2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb8Q91XZ2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb8Q91XZ2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb8Q91XZ2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb8Q91XZ2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms