Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhgb4Q91XX6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhgb4Q91XX6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb4Q91XX6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb4Q91XX6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb4Q91XX6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb4Q91XX6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhgb4Q91XX6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb4Q91XX6 Iqck-206ENSMUST00000208658 2891 ntBASIC20.96■□□□□ 0.95
Pcdhgb4Q91XX6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb4Q91XX6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.94■□□□□ 0.94
Pcdhgb4Q91XX6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhgb4Q91XX6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.92■□□□□ 0.94
Pcdhgb4Q91XX6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb4Q91XX6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb4Q91XX6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms