Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.31■■□□□ 1.48
StrcQ8VIM6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.3■■□□□ 1.48
StrcQ8VIM6 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.3■■□□□ 1.48
StrcQ8VIM6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
StrcQ8VIM6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
StrcQ8VIM6 Gm22325-201ENSMUST00000158904 308 ntBASIC24.29■■□□□ 1.48
StrcQ8VIM6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
StrcQ8VIM6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
StrcQ8VIM6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
StrcQ8VIM6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
StrcQ8VIM6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
StrcQ8VIM6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
StrcQ8VIM6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.27■■□□□ 1.48
StrcQ8VIM6 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.27■■□□□ 1.48
StrcQ8VIM6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
StrcQ8VIM6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
StrcQ8VIM6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
StrcQ8VIM6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Gm6420-201ENSMUST00000193885 723 ntBASIC24.26■■□□□ 1.47
StrcQ8VIM6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Gm38205-201ENSMUST00000192243 258 ntBASIC24.26■■□□□ 1.47
StrcQ8VIM6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
StrcQ8VIM6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.25■■□□□ 1.47
StrcQ8VIM6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.25■■□□□ 1.47
StrcQ8VIM6 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.25■■□□□ 1.47
StrcQ8VIM6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
StrcQ8VIM6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
StrcQ8VIM6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.24■■□□□ 1.47
StrcQ8VIM6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
StrcQ8VIM6 Gm10812-201ENSMUST00000099864 546 ntBASIC24.24■■□□□ 1.47
StrcQ8VIM6 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.24■■□□□ 1.47
StrcQ8VIM6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
StrcQ8VIM6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
StrcQ8VIM6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.22■■□□□ 1.47
StrcQ8VIM6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
StrcQ8VIM6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Trmt13-210ENSMUST00000198454 880 ntBASIC24.21■■□□□ 1.47
StrcQ8VIM6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.21■■□□□ 1.47
StrcQ8VIM6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
StrcQ8VIM6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.21■■□□□ 1.47
StrcQ8VIM6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
StrcQ8VIM6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC24.2■■□□□ 1.46
StrcQ8VIM6 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.2■■□□□ 1.46
StrcQ8VIM6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.19■■□□□ 1.46
StrcQ8VIM6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.19■■□□□ 1.46
StrcQ8VIM6 Gm44878-201ENSMUST00000205812 1295 ntBASIC24.19■■□□□ 1.46
StrcQ8VIM6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Gm6365-201ENSMUST00000054711 744 ntBASIC24.19■■□□□ 1.46
StrcQ8VIM6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
StrcQ8VIM6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
StrcQ8VIM6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.18■■□□□ 1.46
StrcQ8VIM6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.18■■□□□ 1.46
StrcQ8VIM6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC24.18■■□□□ 1.46
StrcQ8VIM6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
StrcQ8VIM6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Gm13534-201ENSMUST00000121169 513 ntBASIC24.17■■□□□ 1.46
StrcQ8VIM6 AC135963.1-201ENSMUST00000211640 717 ntBASIC24.17■■□□□ 1.46
StrcQ8VIM6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
StrcQ8VIM6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
StrcQ8VIM6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
StrcQ8VIM6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
StrcQ8VIM6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
StrcQ8VIM6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms