Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg4Q8VHY0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg4Q8VHY0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg4Q8VHY0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cspg4Q8VHY0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Gm10819-201ENSMUST00000099988 561 ntBASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cspg4Q8VHY0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cspg4Q8VHY0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Gm7290-201ENSMUST00000104990 617 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Gm12918-201ENSMUST00000120234 636 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Gm15710-201ENSMUST00000121821 636 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Gm5075-201ENSMUST00000196916 622 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cspg4Q8VHY0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cspg4Q8VHY0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cspg4Q8VHY0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms