Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cchcr1Q8K2I2 Gm9959-201ENSMUST00000068277 390 ntBASIC23.45■■□□□ 1.34
Cchcr1Q8K2I2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cchcr1Q8K2I2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Cchcr1Q8K2I2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cchcr1Q8K2I2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 Gm22238-201ENSMUST00000175222 88 ntBASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.44■■□□□ 1.34
Cchcr1Q8K2I2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cchcr1Q8K2I2 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cchcr1Q8K2I2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cchcr1Q8K2I2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Golph3-202ENSMUST00000226517 2359 ntBASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cchcr1Q8K2I2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.39■■□□□ 1.34
Cchcr1Q8K2I2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cchcr1Q8K2I2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.34
Cchcr1Q8K2I2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.39■■□□□ 1.33
Cchcr1Q8K2I2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.39■■□□□ 1.33
Cchcr1Q8K2I2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Cchcr1Q8K2I2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.39■■□□□ 1.33
Cchcr1Q8K2I2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Cchcr1Q8K2I2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cchcr1Q8K2I2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cchcr1Q8K2I2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cchcr1Q8K2I2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.36■■□□□ 1.33
Cchcr1Q8K2I2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cchcr1Q8K2I2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cchcr1Q8K2I2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cchcr1Q8K2I2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Cchcr1Q8K2I2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms