Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Golph3-202ENSMUST00000226517 2359 ntBASIC22.01■■□□□ 1.11
Ccdc38Q8CDN8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ccdc38Q8CDN8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Ccdc38Q8CDN8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ccdc38Q8CDN8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22■■□□□ 1.11
Ccdc38Q8CDN8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22■■□□□ 1.11
Ccdc38Q8CDN8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ccdc38Q8CDN8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccdc38Q8CDN8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ccdc38Q8CDN8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccdc38Q8CDN8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
Ccdc38Q8CDN8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.95■■□□□ 1.1
Ccdc38Q8CDN8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Rps24-207ENSMUST00000224568 714 ntBASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.94■■□□□ 1.1
Ccdc38Q8CDN8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccdc38Q8CDN8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ccdc38Q8CDN8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc38Q8CDN8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Ccdc38Q8CDN8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc38Q8CDN8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc38Q8CDN8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.91■■□□□ 1.1
Ccdc38Q8CDN8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms