Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ptcd1Q8C2E4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ptcd1Q8C2E4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.5■■□□□ 1.51
Ptcd1Q8C2E4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ptcd1Q8C2E4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptcd1Q8C2E4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptcd1Q8C2E4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.48■■□□□ 1.51
Ptcd1Q8C2E4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptcd1Q8C2E4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Gm13234-201ENSMUST00000120010 747 ntBASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.47■■□□□ 1.51
Ptcd1Q8C2E4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptcd1Q8C2E4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Gm12441-201ENSMUST00000121806 588 ntBASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptcd1Q8C2E4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Gm10653-202ENSMUST00000139570 835 ntBASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ptcd1Q8C2E4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Reep4-203ENSMUST00000226563 1444 ntBASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptcd1Q8C2E4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptcd1Q8C2E4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptcd1Q8C2E4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms