Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp43Q8BUM9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Usp43Q8BUM9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.13■□□□□ 0.81
Usp43Q8BUM9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp43Q8BUM9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp43Q8BUM9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Usp43Q8BUM9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp43Q8BUM9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp43Q8BUM9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp43Q8BUM9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp43Q8BUM9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp43Q8BUM9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp43Q8BUM9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
Usp43Q8BUM9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp43Q8BUM9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp43Q8BUM9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp43Q8BUM9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp43Q8BUM9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.07■□□□□ 0.8
Usp43Q8BUM9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp43Q8BUM9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Usp43Q8BUM9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp43Q8BUM9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp43Q8BUM9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms