Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cc2d1bQ8BRN9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.89■■□□□ 1.1
Cc2d1bQ8BRN9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cc2d1bQ8BRN9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Cc2d1bQ8BRN9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.88■■□□□ 1.09
Cc2d1bQ8BRN9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.88■■□□□ 1.09
Cc2d1bQ8BRN9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cc2d1bQ8BRN9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cc2d1bQ8BRN9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Cc2d1bQ8BRN9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.85■■□□□ 1.09
Cc2d1bQ8BRN9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cc2d1bQ8BRN9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cc2d1bQ8BRN9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.83■■□□□ 1.08
Cc2d1bQ8BRN9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cc2d1bQ8BRN9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.82■■□□□ 1.08
Cc2d1bQ8BRN9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cc2d1bQ8BRN9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cc2d1bQ8BRN9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cc2d1bQ8BRN9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cc2d1bQ8BRN9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms