Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Suds3Q8BR65 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Suds3Q8BR65 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Suds3Q8BR65 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.19■□□□□ 0.82
Suds3Q8BR65 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.19■□□□□ 0.82
Suds3Q8BR65 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.19■□□□□ 0.82
Suds3Q8BR65 Gm9870-201ENSMUST00000063874 645 ntBASIC20.19■□□□□ 0.82
Suds3Q8BR65 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Suds3Q8BR65 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Suds3Q8BR65 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.17■□□□□ 0.82
Suds3Q8BR65 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Suds3Q8BR65 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Suds3Q8BR65 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Suds3Q8BR65 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Suds3Q8BR65 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Suds3Q8BR65 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Suds3Q8BR65 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.15■□□□□ 0.82
Suds3Q8BR65 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.15■□□□□ 0.82
Suds3Q8BR65 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Suds3Q8BR65 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Suds3Q8BR65 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Suds3Q8BR65 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Suds3Q8BR65 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Suds3Q8BR65 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.11■□□□□ 0.81
Suds3Q8BR65 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Suds3Q8BR65 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.11■□□□□ 0.81
Suds3Q8BR65 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.11■□□□□ 0.81
Suds3Q8BR65 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Suds3Q8BR65 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms