Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trim23Q8BGX0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim23Q8BGX0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Gm43017-201ENSMUST00000198296 752 ntBASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim23Q8BGX0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim23Q8BGX0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim23Q8BGX0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Smad6-203ENSMUST00000179458 273 ntBASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim23Q8BGX0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim23Q8BGX0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim23Q8BGX0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim23Q8BGX0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim23Q8BGX0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms