Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrtm4Q80XG9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrtm4Q80XG9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lrrtm4Q80XG9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrtm4Q80XG9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrtm4Q80XG9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lrrtm4Q80XG9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrtm4Q80XG9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrtm4Q80XG9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Smad6-203ENSMUST00000179458 273 ntBASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.31■□□□□ 0.68
Lrrtm4Q80XG9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrtm4Q80XG9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrtm4Q80XG9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm4Q80XG9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm4Q80XG9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm4Q80XG9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrrtm4Q80XG9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lrrtm4Q80XG9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrrtm4Q80XG9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms