Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm12251-201ENSMUST00000117893 792 ntBASIC20.56■□□□□ 0.88
Trim62Q80V85 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim62Q80V85 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trim62Q80V85 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim62Q80V85 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim62Q80V85 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim62Q80V85 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim62Q80V85 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim62Q80V85 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim62Q80V85 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim62Q80V85 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trim62Q80V85 Gm43173-201ENSMUST00000202246 593 ntBASIC20.53■□□□□ 0.88
Trim62Q80V85 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim62Q80V85 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim62Q80V85 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim62Q80V85 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim62Q80V85 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim62Q80V85 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim62Q80V85 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Trim62Q80V85 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.52■□□□□ 0.88
Trim62Q80V85 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim62Q80V85 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim62Q80V85 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim62Q80V85 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trim62Q80V85 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim62Q80V85 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim62Q80V85 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim62Q80V85 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim62Q80V85 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim62Q80V85 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.5■□□□□ 0.87
Trim62Q80V85 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim62Q80V85 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.5■□□□□ 0.87
Trim62Q80V85 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim62Q80V85 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim62Q80V85 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim62Q80V85 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim62Q80V85 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim62Q80V85 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Trim62Q80V85 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Trim62Q80V85 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim62Q80V85 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.49■□□□□ 0.87
Trim62Q80V85 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim62Q80V85 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.48■□□□□ 0.87
Trim62Q80V85 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim62Q80V85 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim62Q80V85 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim62Q80V85 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim62Q80V85 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim62Q80V85 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim62Q80V85 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim62Q80V85 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms