Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdh8Q7TSK3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh8Q7TSK3 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh8Q7TSK3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdh8Q7TSK3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh8Q7TSK3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdh8Q7TSK3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Smad6-203ENSMUST00000179458 273 ntBASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh8Q7TSK3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh8Q7TSK3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh8Q7TSK3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh8Q7TSK3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh8Q7TSK3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms