Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm8Q6ZWM4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.86■□□□□ 0.93
Lsm8Q6ZWM4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm8Q6ZWM4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lsm8Q6ZWM4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm8Q6ZWM4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm8Q6ZWM4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm8Q6ZWM4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm8Q6ZWM4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lsm8Q6ZWM4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lsm8Q6ZWM4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lsm8Q6ZWM4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Lsm8Q6ZWM4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lsm8Q6ZWM4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm8Q6ZWM4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Lsm8Q6ZWM4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lsm8Q6ZWM4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm8Q6ZWM4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm8Q6ZWM4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm8Q6ZWM4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms