Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim37Q6PCX9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim37Q6PCX9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim37Q6PCX9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim37Q6PCX9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim37Q6PCX9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Nespas-201ENSMUST00000143738 1083 ntBASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim37Q6PCX9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.94■■□□□ 1.1
Trim37Q6PCX9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim37Q6PCX9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim37Q6PCX9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.92■■□□□ 1.1
Trim37Q6PCX9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Trim37Q6PCX9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim37Q6PCX9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim37Q6PCX9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim37Q6PCX9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trim37Q6PCX9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Gm42778-201ENSMUST00000199644 553 ntBASIC21.91■■□□□ 1.1
Trim37Q6PCX9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Trim37Q6PCX9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim37Q6PCX9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.9■■□□□ 1.1
Trim37Q6PCX9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim37Q6PCX9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim37Q6PCX9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim37Q6PCX9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim37Q6PCX9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms