Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Six2Q62232 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Six2Q62232 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Six2Q62232 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Six2Q62232 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.24■□□□□ 0.99
Six2Q62232 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Six2Q62232 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Six2Q62232 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.23■□□□□ 0.99
Six2Q62232 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.23■□□□□ 0.99
Six2Q62232 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.23■□□□□ 0.99
Six2Q62232 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Six2Q62232 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six2Q62232 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six2Q62232 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Six2Q62232 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Six2Q62232 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Six2Q62232 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Six2Q62232 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.21■□□□□ 0.99
Six2Q62232 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six2Q62232 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six2Q62232 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six2Q62232 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.21■□□□□ 0.99
Six2Q62232 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Six2Q62232 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Six2Q62232 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Six2Q62232 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six2Q62232 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.2■□□□□ 0.98
Six2Q62232 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six2Q62232 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six2Q62232 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six2Q62232 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Six2Q62232 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Six2Q62232 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six2Q62232 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.19■□□□□ 0.98
Six2Q62232 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.19■□□□□ 0.98
Six2Q62232 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six2Q62232 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six2Q62232 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six2Q62232 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six2Q62232 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.18■□□□□ 0.98
Six2Q62232 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six2Q62232 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six2Q62232 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.17■□□□□ 0.98
Six2Q62232 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Six2Q62232 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Six2Q62232 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.17■□□□□ 0.98
Six2Q62232 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Six2Q62232 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Six2Q62232 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Six2Q62232 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six2Q62232 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.16■□□□□ 0.98
Six2Q62232 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.16■□□□□ 0.98
Six2Q62232 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six2Q62232 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six2Q62232 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six2Q62232 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Six2Q62232 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Six2Q62232 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.15■□□□□ 0.98
Six2Q62232 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Six2Q62232 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six2Q62232 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Six2Q62232 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six2Q62232 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six2Q62232 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.15■□□□□ 0.98
Six2Q62232 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six2Q62232 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Six2Q62232 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.14■□□□□ 0.97
Six2Q62232 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six2Q62232 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
Six2Q62232 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
Six2Q62232 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six2Q62232 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six2Q62232 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.13■□□□□ 0.97
Six2Q62232 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Six2Q62232 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six2Q62232 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Six2Q62232 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.12■□□□□ 0.97
Six2Q62232 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.12■□□□□ 0.97
Six2Q62232 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Six2Q62232 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six2Q62232 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms