Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm6211-202ENSMUST00000167849 925 ntBASIC29.25■■■□□ 2.27
Ptch1Q61115 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Ptch1Q61115 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ptch1Q61115 Gm6365-201ENSMUST00000054711 744 ntBASIC29.25■■■□□ 2.27
Ptch1Q61115 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC29.25■■■□□ 2.27
Ptch1Q61115 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
Ptch1Q61115 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC29.24■■■□□ 2.27
Ptch1Q61115 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ptch1Q61115 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
Ptch1Q61115 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ptch1Q61115 Mir6982-201ENSMUST00000184354 68 ntBASIC29.24■■■□□ 2.27
Ptch1Q61115 Gm29241-201ENSMUST00000189260 1096 ntBASIC29.24■■■□□ 2.27
Ptch1Q61115 AC122769.4-201ENSMUST00000228166 901 ntBASIC29.24■■■□□ 2.27
Ptch1Q61115 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ptch1Q61115 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Ptch1Q61115 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ptch1Q61115 Gm43403-201ENSMUST00000198011 1786 ntBASIC29.24■■■□□ 2.27
Ptch1Q61115 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Ptch1Q61115 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ptch1Q61115 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ptch1Q61115 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Ptch1Q61115 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ptch1Q61115 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ptch1Q61115 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC29.22■■■□□ 2.27
Ptch1Q61115 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ptch1Q61115 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ptch1Q61115 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC29.21■■■□□ 2.27
Ptch1Q61115 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Ptch1Q61115 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptch1Q61115 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ptch1Q61115 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptch1Q61115 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Ptch1Q61115 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ptch1Q61115 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC29.2■■■□□ 2.27
Ptch1Q61115 Gm6420-201ENSMUST00000193885 723 ntBASIC29.2■■■□□ 2.27
Ptch1Q61115 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ptch1Q61115 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ptch1Q61115 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Ptch1Q61115 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC29.2■■■□□ 2.27
Ptch1Q61115 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Ptch1Q61115 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
Ptch1Q61115 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC29.2■■■□□ 2.26
Ptch1Q61115 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Ptch1Q61115 Gm44878-201ENSMUST00000205812 1295 ntBASIC29.2■■■□□ 2.26
Ptch1Q61115 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Ptch1Q61115 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ptch1Q61115 Gm38205-201ENSMUST00000192243 258 ntBASIC29.19■■■□□ 2.26
Ptch1Q61115 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Ptch1Q61115 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ptch1Q61115 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ptch1Q61115 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ptch1Q61115 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Ptch1Q61115 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC29.17■■■□□ 2.26
Ptch1Q61115 Trmt13-210ENSMUST00000198454 880 ntBASIC29.17■■■□□ 2.26
Ptch1Q61115 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC29.17■■■□□ 2.26
Ptch1Q61115 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ptch1Q61115 Gm5913-201ENSMUST00000119397 1399 ntBASIC29.15■■■□□ 2.26
Ptch1Q61115 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch1Q61115 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch1Q61115 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC29.15■■■□□ 2.26
Ptch1Q61115 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch1Q61115 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch1Q61115 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ptch1Q61115 Gm10655-201ENSMUST00000098658 1397 ntBASIC29.15■■■□□ 2.26
Ptch1Q61115 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ptch1Q61115 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC29.14■■■□□ 2.26
Ptch1Q61115 Gm26524-201ENSMUST00000192339 390 ntBASIC29.14■■■□□ 2.26
Ptch1Q61115 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ptch1Q61115 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Ptch1Q61115 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
Ptch1Q61115 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC29.13■■■□□ 2.25
Ptch1Q61115 AC130671.1-201ENSMUST00000227384 1237 ntBASIC29.13■■■□□ 2.25
Ptch1Q61115 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptch1Q61115 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Ptch1Q61115 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.13■■■□□ 2.25
Ptch1Q61115 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ptch1Q61115 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC29.12■■■□□ 2.25
Ptch1Q61115 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch1Q61115 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch1Q61115 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch1Q61115 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch1Q61115 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Ptch1Q61115 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Ptch1Q61115 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC29.11■■■□□ 2.25
Ptch1Q61115 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptch1Q61115 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptch1Q61115 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ptch1Q61115 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptch1Q61115 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ptch1Q61115 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC29.1■■■□□ 2.25
Ptch1Q61115 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC29.1■■■□□ 2.25
Ptch1Q61115 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ptch1Q61115 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Ptch1Q61115 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms