Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cldn11Q60771 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cldn11Q60771 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn11Q60771 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn11Q60771 Gm11421-201ENSMUST00000122124 294 ntBASIC20.58■□□□□ 0.89
Cldn11Q60771 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn11Q60771 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cldn11Q60771 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cldn11Q60771 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn11Q60771 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn11Q60771 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cldn11Q60771 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn11Q60771 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn11Q60771 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn11Q60771 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cldn11Q60771 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Cldn11Q60771 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.56■□□□□ 0.88
Cldn11Q60771 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.56■□□□□ 0.88
Cldn11Q60771 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn11Q60771 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.55■□□□□ 0.88
Cldn11Q60771 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.55■□□□□ 0.88
Cldn11Q60771 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.55■□□□□ 0.88
Cldn11Q60771 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.55■□□□□ 0.88
Cldn11Q60771 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn11Q60771 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cldn11Q60771 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cldn11Q60771 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn11Q60771 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.54■□□□□ 0.88
Cldn11Q60771 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Cldn11Q60771 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.54■□□□□ 0.88
Cldn11Q60771 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn11Q60771 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Cldn11Q60771 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn11Q60771 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn11Q60771 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn11Q60771 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cldn11Q60771 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn11Q60771 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn11Q60771 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn11Q60771 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.53■□□□□ 0.88
Cldn11Q60771 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn11Q60771 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Cldn11Q60771 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.52■□□□□ 0.88
Cldn11Q60771 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.52■□□□□ 0.88
Cldn11Q60771 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn11Q60771 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.51■□□□□ 0.87
Cldn11Q60771 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cldn11Q60771 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.51■□□□□ 0.87
Cldn11Q60771 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cldn11Q60771 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn11Q60771 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cldn11Q60771 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn11Q60771 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Gm8495-201ENSMUST00000188740 694 ntBASIC20.5■□□□□ 0.87
Cldn11Q60771 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn11Q60771 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.5■□□□□ 0.87
Cldn11Q60771 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms