Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.95■□□□□ 0.62
Xrcc1Q60596 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Xrcc1Q60596 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Xrcc1Q60596 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Gm8493-201ENSMUST00000196881 489 ntBASIC18.93■□□□□ 0.62
Xrcc1Q60596 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Xrcc1Q60596 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Xrcc1Q60596 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Xrcc1Q60596 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.9■□□□□ 0.62
Xrcc1Q60596 Gm43173-201ENSMUST00000202246 593 ntBASIC18.9■□□□□ 0.62
Xrcc1Q60596 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Xrcc1Q60596 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.89■□□□□ 0.61
Xrcc1Q60596 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc1Q60596 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc1Q60596 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc1Q60596 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Xrcc1Q60596 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.88■□□□□ 0.61
Xrcc1Q60596 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Serp2-204ENSMUST00000228055 705 ntBASIC18.87■□□□□ 0.61
Xrcc1Q60596 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Xrcc1Q60596 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms