Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim38Q5SZ99 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim38Q5SZ99 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim38Q5SZ99 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim38Q5SZ99 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim38Q5SZ99 Gm12922-201ENSMUST00000120626 809 ntBASIC20.52■□□□□ 0.88
Trim38Q5SZ99 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
Trim38Q5SZ99 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim38Q5SZ99 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim38Q5SZ99 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim38Q5SZ99 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim38Q5SZ99 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim38Q5SZ99 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Golgb1-201ENSMUST00000023534 498 ntBASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim38Q5SZ99 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim38Q5SZ99 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim38Q5SZ99 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim38Q5SZ99 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim38Q5SZ99 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim38Q5SZ99 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.46■□□□□ 0.87
Trim38Q5SZ99 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.46■□□□□ 0.87
Trim38Q5SZ99 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim38Q5SZ99 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trim38Q5SZ99 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim38Q5SZ99 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms