Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8d-1Q5R1H8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Gm10232-201ENSMUST00000089221 720 ntBASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8d-1Q5R1H8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav8d-1Q5R1H8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav8d-1Q5R1H8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Gm15820-201ENSMUST00000201566 728 ntBASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8d-1Q5R1H8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav8d-1Q5R1H8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8d-1Q5R1H8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8d-1Q5R1H8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8d-1Q5R1H8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8d-1Q5R1H8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8d-1Q5R1H8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8d-1Q5R1H8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav8d-1Q5R1H8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8d-1Q5R1H8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms